Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_002167.1 Length=39732 Score E Sequences producing significant alignments: (Bits) Value seq12086 98.7 3e-16 >seq12086 Length=38917 Score = 98.7 bits (108), Expect = 3e-16 Identities = 78/94 (83%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 33843 AGGCGAAAAAGGTAAGCGCGATAGCATTATTGTCGTTGCCCAGTTGTCGCCGGAATTCAC 33902 ||| ||| ||||||||||||| ||||||||||| ||||| || || ||||| ||||| || Sbjct 1686 AGGTGAAGAAGGTAAGCGCGACAGCATTATTGTAGTTGCTCAATTATCGCCTGAATTTAC 1627 Query 33903 CGCTCGCCTTGTTGACCGCTGGCGAGAGCTTGAA 33936 ||||| || |||||||||||| ||| || ||| Sbjct 1626 AGCTCGACTAGTTGACCGCTGGAAAGAACTCGAA 1593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126970773334248