Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_002484.2 Length=56426 Score E Sequences producing significant alignments: (Bits) Value seq27971 98.7 4e-16 >seq27971 Length=2576 Score = 98.7 bits (108), Expect = 4e-16 Identities = 133/185 (72%), Gaps = 3/185 (2%) Strand=Plus/Minus Query 3746 GGTGAAGGTGTCACGGCAAAACGCATTGCTGGCGCTCTGCGCTCCATCGGCAACGATGTC 3805 || || || || || || || || ||| |||| || || || | || || ||| ||| Sbjct 2217 GGGGAGGGAGTAACTGCTAAGCGTATTTCTGGTGCACTCCGGGCTATTGGGAACAATG-- 2160 Query 3806 GATGTGACCGTGAACATCAACAGCCCCGGCGGCGACGTATTCGAAGGCCTGGCCATTTAC 3865 |||| ||| || ||||| ||||||||||| ||| | || ||||| ||||| |||||| Sbjct 2159 -ATGTAGTCGTCAATATCAATAGCCCCGGCGGTGACATGTTTGAAGGGCTGGCAATTTAC 2101 Query 3866 AACCTGCTGCGCGAGCACAAGGGCAAGGTCACGGTGAACATCATCGGCCTGGCTGCCTCT 3925 ||||| || || | |||| || || ||||| || || ||| | || | ||||| || Sbjct 2100 AACCTACTACGAGCCCACAGCGGTAAAGTCACCGTTAATATCTTGGGTATTGCTGCTTCA 2041 Query 3926 GCCGC 3930 ||||| Sbjct 2040 GCCGC 2036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180370533752496