Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_002671.1 Length=15179 Score E Sequences producing significant alignments: (Bits) Value seq31898 105 6e-19 >seq31898 Length=2556 Score = 105 bits (116), Expect = 6e-19 Identities = 106/137 (77%), Gaps = 3/137 (2%) Strand=Plus/Plus Query 14533 CAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATCACTTCAGAAGAAG---GCA 14589 |||||||||||||||||| |||||||| ||||| ||||| ||| | | ||| | ||| Sbjct 899 CAGTAAAATGGTTTAACGACGATAAAGGTTTTGGTTTTATTACTCCTGCAGATGGCAGCA 958 Query 14590 AAGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCAAATCACTTGATGAAG 14649 ||||| |||| | ||||||||| |||||||| ||| | || ||||| | | ||||| Sbjct 959 AAGATGTGTTTGTTCACTTCTCTGCAATCCAGAGCGATAGCTTTAAATCTTTAGCTGAAG 1018 Query 14650 GTCAAAAAGTTGAATTT 14666 | ||| ||||| |||| Sbjct 1019 GCCAACAAGTTTCATTT 1035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48435818615836