Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq31959 111 1e-19 >seq31959 Length=2257 Score = 111 bits (122), Expect = 1e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 21138 GACGTTGCCCAGATCGCCGACGTGCCGCTCTGCGGCGTCGGGAGCGCCGTGATTTTGGTG 21197 || ||||||||| ||||||| || ||||| || || ||| |||||||| | | | Sbjct 791 GATGTTGCCCAGGTCGCCGAGATGGCGCTCCTCGTCGGTGGGGGCGCCGTGCTCCTTGCC 850 Query 21198 CGTAGGGTTAAAGTGCTCGCCGGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAACTCGTG 21257 | ||||| ||||| ||||||||| ||||||||||| || |||||||||||||||| Sbjct 851 CAGCGGGTTGAAGTGGGGGCCGGCGGAGATGCAGCCGTTGGTGTTGTCGCCGAACTCGTG 910 Query 21258 AACGTGAAAGCCGTGCAGTCC 21278 || || ||||||||||| || Sbjct 911 CACATGGAAGCCGTGCAGCCC 931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414405225269404