Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_004813.1 Length=57930 Score E Sequences producing significant alignments: (Bits) Value seq12086 104 9e-18 >seq12086 Length=38917 Score = 104 bits (114), Expect = 9e-18 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 17082 TATATATTCGAAGGCGAACAAGGTAAGCGAGGCAGCATTATTGTCGTCGCTCAGTTGTCG 17141 ||| |||| ||| ||| |||||||||| | |||||||||||| || ||||| || ||| Sbjct 1697 TATTTATTTTCAGGTGAAGAAGGTAAGCGCGACAGCATTATTGTAGTTGCTCAATTATCG 1638 Query 17142 CCGGAATTCACCGCTCGCCTTGTTGACCGCTGGCGAGAACTCGAA 17186 || ||||| || ||||| || |||||||||||| |||||||||| Sbjct 1637 CCTGAATTTACAGCTCGACTAGTTGACCGCTGGAAAGAACTCGAA 1593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185181438249264