Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_005066.1 Length=164018 Score E Sequences producing significant alignments: (Bits) Value seq3187 102 9e-17 >seq3187 Length=10884 Score = 102 bits (112), Expect = 9e-17 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 133199 TTGTGTGCCTTTTAAGTGAAGTTGTTCATCACGCGCAATAAATTTCATGATCTTCGCGTT 133258 ||| |||||| ||||||| | ||||||||| ||||| | || || || || || || Sbjct 5380 TTGAGTGCCTGTTAAGTGTAAAGCTTCATCACGTGCAATCAGCTTGATAATTTTAGCATT 5439 Query 133259 ACCTTCCAGTAAACCACGTTCGGCAAAGCTGAAAGTACATGCAAAGGACACATAAAAACG 133318 |||||||| || ||||||| || || ||| | ||| |||||| |||||||| || Sbjct 5440 ACCTTCCATTAGCTCACGTTCTGCGAATGCGAATGAACAGGCAAAGCTGACATAAAATCG 5499 Query 133319 GATTGCTTCCAGTGCATTTAC 133339 ||||||||||||||| || || Sbjct 5500 GATTGCTTCCAGTGCGTTAAC 5520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524512060226080