Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28]
33,166 sequences; 99,885,510 total letters
Query= NC_007023.1
Length=180500
Score E
Sequences producing significant alignments: (Bits) Value
seq3187 143 3e-29
seq27670 93.3 5e-14
>seq3187
Length=10884
Score = 143 bits (158), Expect = 3e-29
Identities = 156/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 41985 TGGTGGTGAAGCAGTACATACAGGCGTGATCCCGTTCTGGAAACATATTCAGACAGCGGT 42044
||| |||||||| | || |||||| || ||||||| || || | ||||| |||||
Sbjct 7731 TGGCGGTGAAGCTTTCCACACAGGCTGTATTCCGTTCTACAAGCACTTCCAGACTGCGGT 7672
Query 42045 TAAATCCTGTTCACAAGGTGGCGTTCGTGGTGGTGCTGCAACGTTGTATTATCCGATCTG 42104
|||||| || || |||||||| || |||||||||||||| || || | ||| || || ||
Sbjct 7671 TAAATCTTGCTCTCAAGGTGGTGTCCGTGGTGGTGCTGCTACCTTATTTTACCCAATTTG 7612
Query 42105 GCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAAAACAACAAAGGTGTTGAGAATAACCG 42164
||| | |||||||||| |||| | || |||||||||||| || ||||| ||||||
Sbjct 7611 GCACCTTGAAGTTGAAAGCCTGTTAGTCCTGAAAAACAACCGCGGGGTTGAAGGTAACCG 7552
Query 42165 TATTCGTCACCTGGATTATGGCGTTCA 42191
|||| || |||| || || || ||
Sbjct 7551 AGTTCGCCATATGGACTACGGTGTGCA 7525
>seq27670
Length=3875
Score = 93.3 bits (102), Expect = 5e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 51959 CGCGAAACCCTGGAAGATGCTGTGAAACATCCTGAGAAGTACCCACAGTTAACGATCCGC 52018
|| |||| ||| ||| || || || | || ||||| || |||||| | || |||||
Sbjct 1606 CGTGAAATGCTGTTAGAAGCGATGGAAAACCCAGAGAAATATCCACAGCTGACTATCCGT 1547
Query 52019 GTTTCAGGTTATGCAGTTCGCTTTAATGCACTGACTCCAGAACAACAGCGCGACGTTAT 52077
|| |||||||||||||| || ||||| |||||||| ||||||||||| ||||||||
Sbjct 1546 GTATCAGGTTATGCAGTGCGTTTTAACTCACTGACTAAAGAACAACAGCAAGACGTTAT 1488
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577232594545600
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |