Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq18065 93.3 1e-15 >seq18065 Length=3544 Score = 93.3 bits (102), Expect = 1e-15 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 3332 ACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTT 3391 |||| ||| || |||||||| | | |||| ||| || || |||||||||||||| | Sbjct 2635 ACCCGATGGCCCGGGTCTTTCCCAAAGTCACCAAATGCACGTTCCACAAATACGGTCCCT 2694 Query 3392 CGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGA 3451 | ||| | || | | ||| || || ||| | || || |||| | |||||||||| Sbjct 2695 CCGGCGGCGTGCAGTCGTTCGACGGGCTGTGCGTGCTGCCCCTGAACATTGTCAACGAGA 2754 Query 3452 AGATCTACATTTTCCTCTGGTTCTGGTTC 3480 |||||||| | ||||| |||||||||||| Sbjct 2755 AGATCTACGTGTTCCTGTGGTTCTGGTTC 2783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12475472841000