Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_009821.1 Length=164270 Score E Sequences producing significant alignments: (Bits) Value seq3187 105 7e-18 >seq3187 Length=10884 Score = 105 bits (116), Expect = 7e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 133206 TTGTGTGCCTTTTAAGTGAAGTTGTTCATCACGAGCAATAAATTTCATGATCTTCGCGTT 133265 ||| |||||| ||||||| | ||||||||| ||||| | || || || || || || Sbjct 5380 TTGAGTGCCTGTTAAGTGTAAAGCTTCATCACGTGCAATCAGCTTGATAATTTTAGCATT 5439 Query 133266 ACCTTCCAGTAAGCCACGTTCGGCAAAGCTGAAAGTACATGCAAAGGACACATAAAAACG 133325 |||||||| || ||||||| || || ||| | ||| |||||| |||||||| || Sbjct 5440 ACCTTCCATTAGCTCACGTTCTGCGAATGCGAATGAACAGGCAAAGCTGACATAAAATCG 5499 Query 133326 GATTGCTTCCAGTGCATTAAC 133346 ||||||||||||||| ||||| Sbjct 5500 GATTGCTTCCAGTGCGTTAAC 5520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 525318125912800