Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_010105.1 Length=170523 Score E Sequences producing significant alignments: (Bits) Value seq3187 136 4e-27 >seq3187 Length=10884 Score = 136 bits (150), Expect = 4e-27 Identities = 137/176 (78%), Gaps = 4/176 (2%) Strand=Plus/Plus Query 141946 CCGTAGTCCATATGACGAATACGGTTCTCATCGACACCTTTGTTGTTTTTCAAAACGAGC 142005 |||||||||||||| |||| ||||| | || || || ||||||||||| || | | Sbjct 7531 CCGTAGTCCATATGGCGAACTCGGTTACCTTCAACCCCGCGGTTGTTTTTCAGGACTAAC 7590 Query 142006 AGATTTTCAACTTCCAAATGCCAAATAGG--ATAATAAGCAGTAGCAGCGCCGCCACGGA 142063 || |||||||||| | |||||||| || | |||||| |||||||| || ||||||| Sbjct 7591 AGGCTTTCAACTTCAAGGTGCCAAATTGGGTAAAATAAG--GTAGCAGCACCACCACGGA 7648 Query 142064 TTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAATGGAATA 142119 |||||||| || || |||||||| ||||||||||| || || |||| |||||| Sbjct 7649 CACCACCTTGAGAGCAAGATTTAACCGCAGTCTGGAAGTGCTTGTAGAACGGAATA 7704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545319430432880