Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq28082 114 1e-20 >seq28082 Length=1963 Score = 114 bits (126), Expect = 1e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 69534 GGTTATGTGTTTTTCTTTTACCGAGAAGTGGCCGTCGAGCATATTAACTGCGGAAAGACC 69593 || || ||||| ||||| | ||| || || || | ||| | || |||| ||| ||| | Sbjct 1689 GGCTACGTGTTGTTCTTCTTCCGCGAGGTCTCCATGGAGTACATGAACTTCGGCAAGGCG 1630 Query 69594 ATTTATTCGAGAGTCGCTCGTGTCTGCAAAAATGATCACGGCGGCCCACATCGGTACTCG 69653 | || ||| | |||| || |||||||| || |||| ||| |||||| || | ||| Sbjct 1629 GTGTACTCGCGCGTCGGCCGGGTCTGCAAGAACGATCGCGGGGGCCCATATACGCTGTCG 1570 Query 69654 GATAAATGGACGTCATTTTTAAAGACTCGACTAAATTGTTCGGTGCCCGGCGAATTCCCC 69713 | | |||||| | ||| | ||| |||| || ||||| |||||||||||||| |||||| Sbjct 1569 AAGAGTTGGACGACCTTTCTGAAGGCTCGCCTCAATTGCTCGGTGCCCGGCGAGTTCCCC 1510 Query 69714 TTTTACTT 69721 || ||||| Sbjct 1509 TTCTACTT 1502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408078183760976