Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_012638.1 Length=165429 Score E Sequences producing significant alignments: (Bits) Value seq27670 109 6e-19 >seq27670 Length=3875 Score = 109 bits (120), Expect = 6e-19 Identities = 111/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 60974 GTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 61033 || || ||||||| |||||||| |||| ||||| |||||| |||||||| || ||| Sbjct 1473 GTGAAAGTACGAGTAATAACGTCTTGCTGTTGTTCTTTAGTCAGTGAGTTAAAACGCACT 1532 Query 61034 GCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCT 61093 |||||||| ||||||||||| |||||||| |||||||| || || | | | || ||| Sbjct 1533 GCATAACCTGATACACGGATAGTCAGCTGTGGATATTTCTCTGGGTTTTCCATCGCTTCT 1592 Query 61094 TCCAGAGTTTCACGACGCAGAACGT 61118 ||| ||||||| || ||||| Sbjct 1593 AACAGCATTTCACGGTTCATAACGT 1617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529025388337040