Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq6483 86.0 2e-12 >seq6483 Length=21038 Score = 86.0 bits (94), Expect = 2e-12 Identities = 143/204 (70%), Gaps = 6/204 (3%) Strand=Plus/Plus Query 8914 CAGCTTAATCGAGGGCTCGAGAATCGCCCAAACAAGCGGCCCGTCATGTCCGATCTGCGC 8973 |||||||| || | || ||| | || | | || || || || | ||||| |||| Sbjct 364 CAGCTTAACCGTAGCCTTGAGCAACGTGCGGATAAACGCCCAGTTAACTCCGACTTGCGT 423 Query 8974 GAGTCGGGTGCGATCGAGCAGGATGCCGACGTGATCCTCTTTATCTACCGCGATGAGGTC 9033 || || || | |||||||||||||| ||| | ||| | ||||||||||| |||||||| Sbjct 424 GAATCAGGGTCTATCGAGCAGGATGCGGACTTAATCATGTTTATCTACCGTGATGAGGTT 483 Query 9034 TATAACCCCGACAGCGCAGATC---GCGGTACGGCCGAAATCATCATTGCGAAGCAGCGA 9090 || || |||||| || || | ||| || || || || | | ||||| || Sbjct 484 TACCACGATAACAGCG-AGCTCAAAGGGGT--TGCGGAGATTATTTTAGGTAAGCAACGT 540 Query 9091 AACGGGCCGATTGGCACCGTACGG 9114 |||||||||||||| || ||| || Sbjct 541 AACGGGCCGATTGGTACGGTAAGG 564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127495366643736