Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_014661.1 Length=164093 Score E Sequences producing significant alignments: (Bits) Value seq3187 95.1 1e-14 >seq3187 Length=10884 Score = 95.1 bits (104), Expect = 1e-14 Identities = 134/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 141468 CCATAATCCATGTGACGAATACGGTTTTCTTCAACACCTTTGTTGTTCTTCAACACAATC 141527 || || ||||| || |||| ||||| ||||||| || |||||| |||| || | | Sbjct 7531 CCGTAGTCCATATGGCGAACTCGGTTACCTTCAACCCCGCGGTTGTTTTTCAGGACTAAC 7590 Query 141528 AAGTTTTCCACTTCAAGGTGCCACATAGGGAAGAACATTGTTGCCGAACCTTTACGAATA 141587 | | |||| |||||||||||||| || ||| | || | || || | ||| ||| | | Sbjct 7591 AGGCTTTCAACTTCAAGGTGCCAAATTGGGTAAAATAAGGTAGCAGCACCACCACGGACA 7650 Query 141588 CCACCTTGAGAACAGCAATGAACCGCTGAGTTAAAGTGCTTCCAGAAAGGTACTAC-GCC 141646 ||||||||||| || | | |||||| | | |||||||| |||| || | ||| ||| Sbjct 7651 CCACCTTGAGAGCAAGATTTAACCGCAGTCTGGAAGTGCTTGTAGAACGG-AATACAGCC 7709 Query 141647 AGTGTG 141652 ||||| Sbjct 7710 TGTGTG 7715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524751960728080