Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq3370 379 3e-100 seq15048 163 4e-35 seq16914 138 1e-27 seq17051 129 7e-25 seq231 102 1e-16 >seq3370 Length=4466 Score = 379 bits (420), Expect = 3e-100 Identities = 775/1140 (68%), Gaps = 16/1140 (1%) Strand=Plus/Plus Query 7019 AAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTA 7078 ||||| ||||| || || | || || || || || ||||| |||||||| || | || Sbjct 3317 AAGATAGCGGCCTGAACGGCAGCGCCATAGGCCACAGCCTCGTCGGGGTTGATGGACTTG 3376 Query 7079 TTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTC 7138 |||| ||| || ||||| || ||| |||| |||| | || ||||| || || Sbjct 3377 TTCAATTCCTTGCCGTTGAACAGATCTTGCAACAGACGTTGCACCTTTGGGATACGGGTG 3436 Query 7139 GATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGT 7198 || || || ||||| || || || | | || || || ||||| | ||| |||| Sbjct 3437 GAGCCGCCAACCAACACAATATCGTGAATGGCTGACTTGTCCATCTTGGCGTCGCGAATA 3496 Query 7199 GTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGT 7258 | || ||||| || ||||| | ||||||||||| || ||||| ||||| Sbjct 3497 GCCTTCTCGACGGGGTCCATTGTGCTGCGGAACAAGTCGGCGTTCAACTCCTCGAAACGG 3556 Query 7259 GCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTT 7318 ||||| || || || || |||||||| || ||| | | |||||| || |||||| | Sbjct 3557 GCACGAGTGATCGAGGTGTAGAAATCGGTACCCTCGAACAGCGAATCGATCTCAATGCTC 3616 Query 7319 GTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGA 7378 | || | | ||| || | || |||||||||||||| || || || || || ||||| Sbjct 3617 GCCTGGGTGGACGACGACAGGGTACGCTTTGCGCGCTCGCAAGCGGTGCGCAAGCGACGC 3676 Query 7379 AGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACT-CTTCAGAGAA 7437 ||||| ||| ||| | || | ||| ||||| || || || || |||| || || | || Sbjct 3677 AGGGCGCGCTTGTTGCTGGTGAGATCCTTCTTGTGCTTGCGCTTGAACTCCTGCACA-AA 3735 Query 7438 GTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGC 7497 ||| || || | |||||||||||||||||||| || ||||| || || |||| Sbjct 3736 GTGGGTAACCAGACGGTTGTCGAAATCTTCACCACCCAAATGGGTATCGCCAGCAGTCGA 3795 Query 7498 TTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACC 7557 ||||| || ||||| || | || ||| | | || |||||||| ||||| ||||| Sbjct 3796 CTTGACCTCGAAGATGCCATCGTCGATGGACAGAATGGACACATCAAAAGTACCGCCACC 3855 Query 7558 CAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGAT 7617 || || || ||||| ||||| || || | ||||| || | || || ||||| Sbjct 3856 CAAATCGAAGATGAGCACGTTGCGCTCACCGACAGCCTTCTTGTCCAAGCCATAGGCGAT 3915 Query 7618 AGCCGCCGCCGTTGGTTCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCG 7676 || || || || || || || || ||||| || ||| |||| || ||||| || | | Sbjct 3916 GGCAGCGGCAGTGGGCTCGTTGATGATACGCAACACA-TTCAAACCGGCAATGGTACCGG 3974 Query 7677 CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGT 7736 |||| || || || || ||||| || ||||| |||||||||||||| || | || || | Sbjct 3975 CATCCTTGGTAGCCTGACGTTGTGAGTCGTTGAAGTAGGCCGGGACAGTGATCACAGCAT 4034 Query 7737 CCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCG 7796 ||||| |||| || | || | || ||| | || ||||| ||||| || ||||||| Sbjct 4035 TGCTGACTGTCTTGCCCAAGTAGGCCTCGGCGGTCTCCTTCATCTTGGTCAGGACCATCG 4094 Query 7797 ATGAAATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATG 7855 | || || || |||| | | | || ||| | || | || | |||| | ||| || Sbjct 4095 AAGAGATTTCCTCAG-GGAAGAAAGTCTTCTTCTCGTCCTTGTAGACAACCTGGATCTTG 4153 Query 7856 GGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACC 7915 || || || || || | |||| | | ||| | ||||| ||| ||| || Sbjct 4154 GGCTT---GCCATCAGCGCTAACCACCTCGAAGGGCCAGTGCTTCATGTCGGATTGCAC- 4209 Query 7916 TGTTGG--TCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGG 7973 | || ||| || || | || || | |||||| ||||| |||| ||||| | | Sbjct 4210 -GGCGGCATCCTCGAATTTGCGACCAATCAAACGCTTAGCATCGAAAATGGTGTTGGTTG 4268 Query 7974 GGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAA 8033 |||||||||| || || || || || || || || |||||||| | |||| || | Sbjct 4269 GGTTCATGGCGACCTGATTTTTGGCTGCATCACCAATGAGACGTTC---AGTTTCGGTGA 4325 Query 8034 ACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGT 8093 | || || ||||| || || || || || || |||||||| ||||||||||| || Sbjct 4326 AGGCAACATACGACGGAGTGGTACGGTTGCCCTGGTCGTTGGCAATAATTTCAACTTTTC 4385 Query 8094 CGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAG 8153 | | ||| | || || ||||| || || ||||| || ||||||||||| | ||| ||| Sbjct 4386 CATGTTGGAACACACCCACGCAAGAGTAGGTTGTGCCCAAATCAATACCAACAGCTGGAG 4445 >seq15048 Length=4365 Score = 163 bits (180), Expect = 4e-35 Identities = 1179/1861 (63%), Gaps = 89/1861 (5%) Strand=Plus/Plus Query 104355 TTTACTTCGAAGGTAATACATACCCGTTTTTAAACCAGTTTTCCACGCGTACATGTGCAT 104414 |||| ||| |||||||||||| || ||||||| ||||| ||||||||| | | || || Sbjct 1318 TTTAGTTCTAAGGTAATACATTCCAGTTTTTAGACCAGCTTTCCACGCAAAGAAATGAAT 1377 Query 104415 AGACGA-AAGTTTTGAAATTGTTGGACTCTCGAC---GAATAAGTTCATACTTTGACTTT 104470 || | || || | | | |||| ||||| | ||||| || | || |||| Sbjct 1378 CGATGTTAACTTCCCATAAT-TTGG-CTCTCCAACATGAATA--TTAAATGACTGGCTTT 1433 Query 104471 GGTCTATATACACACCTCTATCCGCCGCCATATCGATGATTGTTT-TTTGACTCAT--TT 104527 | || ||| | | |||||||| || ||||| | |||||| ||| ||| || || Sbjct 1434 GATCGATAAATGCTCCTCTATCAGCAGCCATT---AAAATTGTTGATTTAACTGATATTT 1490 Query 104528 CCCATACGGTTTTATACA-ATTCCTTAAGATCATCGGGTATA---TCAATAATGTTTTGA 104583 |||| || ||||| || | || || || | | | |||||| || ||| |||||| Sbjct 1491 CCCAAACAGTTTTGTAAAGATCCCGTATGTTT-TGTGGTATACTTTCGATA---TTTTGA 1546 Query 104584 ACAGACCCATTTGCCTTCACCATAAGATC---TTTCATTTCCTTCGACCAGAGTCCACGT 104640 | || ||| | || | || | || |||||||| | ||| | | || Sbjct 1547 ATGGAACCAC--GGCTAGAT-ATTATTTCGTTTTTCATTTGTTCATCCCACAAATCTAGT 1603 Query 104641 TCTTTCAAATCGTTTACTAAATGTTTGTTTACGACGACAAATTCACCCGCGAGTGTTCGT 104700 || | | ||| ||| ||| || | ||| || || |||||| |||| | | ||| Sbjct 1604 TCGGTTAGATCTCTTAGTAAGTGATGGTTAACCACTTGAAATTCGCCCGACAATACTCGC 1663 Query 104701 CTCAAATAGATATTGGTCGTATACGGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGAT 104760 | | || ||||| | |||||||||||| ||| | ||||| || || |||||||| | Sbjct 1664 CGCGTGTAAATATTTGACGTATACGGTTCAAAAGATTCGTTATTTCCCAAAATCTGCGCG 1723 Query 104761 GTGGATGCGGTAGGCATAGGTGCAAGAAGAAGACTATTCATAGTTCC---TTTCTTAACA 104817 |||||||| || ||||| ||||| | ||| ||| ||| | | || |||||| | Sbjct 1724 GTGGATGCTGTTGGCATTGGTGCCACAAGTAGAGAGTTCCTTATACCATATTTCTTTAT- 1782 Query 104818 AGTTTACGCATGGCATTCCAATCGTATCGACCACTAAACTTTGGGTCTCGATCCC-ACAT 104876 |||| | || ||||| ||| |||| || | | || | |||| |||| Sbjct 1783 --TTTATTTTTTAAAT--CAATCCAATC--CCACAAATTTGTAGGAGTTACTCCCCACAT 1836 Query 104877 ATCGAATTGAAGAATACCTTTACTAAACGGTGAC--CCCTTAAACGTTTCATAAGGACCG 104934 ||| | || || || || || || | ||| ||| || | | | |||||||| || || Sbjct 1837 ATCATACTGCAGTATTCCCTTGCTGA-CGG-GACTTCCGTCATATGTTTCATATGGTCCA 1894 Query 104935 TACATTTCGGCAAGTTCACACGACGATTCGAGTGATGCGTGGTAGATAGTTTCGAATATA 104994 | |||| || || ||||| | || | || | || || ||||| || || Sbjct 1895 AATTTTTCTGCCAGCTCACAACTTGCCTCCAATGCGCCAAAATAAATTGTTTCAAAGATT 1954 Query 104995 TCAATGTTGA--------GTTTTCTCGATTCTTCTGAACCGAATGTCATTCTTAACATGA 105046 | | || | | ||||| || || || | || ||||| || | Sbjct 1955 TGCTTATTCAAAAGAAACGCGTTCTCACTT--TCATAAGGGTATCTCATTA--AA----A 2006 Query 105047 TAAACACGTCAGCGAGACCCTGAACACCAATACCGATGGGTCTGTGACGCATATTTGAAC 105106 |||| |||| || || || |||||||||||||| || ||||| || |||| ||| || Sbjct 2007 TAAAAGCGTCGGCCAGCCCTTGAACACCAATACCAATAGGTCTATGTCGCAAATTCGATT 2066 Query 105107 GTTTCCCGTTTTCGGT--TGGGTAAAAGTTTTTATCAATAACCTTGTTTAAGTTACGTGT 105164 ||| | || ||| ||| ||| | ||| |||||| | || ||||| || || Sbjct 2067 TTTTTGC--TTCGGGTAATGGATAATAATTTACATCAATTATTTTATTTAAATTCTTGGT 2124 Query 105165 AACCATTTTCGTAACACGATGTAACTCTTCATGGTTAAACTCGTTCTTCTC-GACATCAA 105223 || ||||| || || | ||| | || | || ||| | || | | | | || || Sbjct 2125 GACTATTTTTGTGACCTCTTTTAATTTTTTAAAGTCAAAGACTTTATCCGCTGTCACAAA 2184 Query 105224 CGTATTTTGGTAACGCGATTGATGCGAGATTACATACGGCGGTTTCTTCCTTATCCGTAA 105283 | ||||| || || || || ||||| || || ||||| | || || ||| | Sbjct 2185 CATATTT----AAAGCAATCGAAGCGAGGTTGCAAACGGCTATCTCATCTGGTGCCGAAT 2240 Query 105284 ACTCCAGAATTTCTGTACACAAATTTGATGATTTAATCGTACCAACGTGTTTATGGTTCG 105343 | || | |||||| ||||| | ||| |||| || ||||| | || || ||||| | Sbjct 2241 ATTCAACAATTTCAGTACATAGATTACTGCATTTTATAGTACCGAGGTTTTGTTGGTT-G 2299 Query 105344 ACTTTTC-ATTACACGCGTCTTTGTAAAGCATATATGGGGTTCCCGTTTCACTTTGGGAT 105402 ||||| ||| || | |||||||| |||||||||||||| || ||||| ||| | Sbjct 2300 CTTTTTCTATTGCATGAATCTTTGTATAGCATATATGGGGTACCTGTTTCCACTTGTGCC 2359 Query 105403 TTAATAATTGCTTTCCAAATCTCCGAAGCTGGTACAACTTTAGTTGCGATACCTTCAGAT 105462 | ||||| || ||||| | ||| ||| | || | ||| || || Sbjct 2360 TCTATAATCGCAAACCAAAGGGACTGGGCTTTTACTTTTCTATTCGCGCGTCCCTCTTTC 2419 Query 105463 TCGTATTTCTCGTA-AAGATCTTCAAACTCTTTACCGTACACGTC-TGAAAGACCCTTTG 105520 || ||||| || || ||| || ||||| || ||| | || || || ||| || Sbjct 2420 TCATATTTTTCATACAAGGTC-TCAAATTCCGAACCCCAAACTTCATGCAAG-CCAGGAC 2477 Query 105521 CCTGATCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAAT 105580 || | ||| || | | ||||||| | | | |||||| |||||||| ||||||| Sbjct 2478 ACTTGTGAGGGCACATAAGGGACCAATCTTCGTTAGCTTCAACTCGTTTCATAAACAAAT 2537 Query 105581 CTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTT-CATCACCTTGATTC 105639 | |||||||||| || |||| | || ||| || |||| | | || || || Sbjct 2538 CGGGAATCCACAAAGCATAAAATAAATCACGAGCTCTATGTTCTTCCTTGCCCGTGTTTT 2597 Query 105640 AAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAA-- 105697 || || | ||| || | |||||| | |||||| || ||||| |||| ||||| Sbjct 2598 TCTTTAA-ATCCAAAAACTCAAAAATATCAGAGTGCCAAGGCTCTAAGTAGATTGCAAAA 2656 Query 105698 ----TAGACCCTTTACGACGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACT 105753 || || ||| | |||| | |||| | || || | || ||| | ||| Sbjct 2657 GCTCCAGGCCTTTTTC--CGCCTC-CTTGGTCAACGTAGCGGGCCACATTGTTGAAAACT 2713 Query 105754 CGTAACATTGGAATAATACCATCGGATGTTCCATTTGTTCC--ACGAATATGTGATTTAT 105811 | || |||||| | | || | || |||||||| ||||| | | ||||| | | Sbjct 2714 CTTAGCATTGGCACCAGGCCGTTAGAAGTTCCATTAGTTCCTGATATAGATGTGCCT--T 2771 Query 105812 TTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCAC 105871 | || |||| ||||| | || |||||||| ||||| | ||| || || | Sbjct 2772 TAGCTCGTATGCAATGAACATTTATTCCAATACCTCCAGCTGATTTAGATATCATAGCGC 2831 Query 105872 ACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAAC 105931 | | || |||| | ||||||| || || |||| | | | || ||||| | Sbjct 2832 ATTGTTCAACTGATTTAAAAATACCTTCAATTGAATCTGCAACCATTGTAAGTAGGAAGC 2891 Query 105932 ACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGA 105991 | ||||| | ||| |||| ||| ||||| || || || |||| |||||| | | Sbjct 2892 AAGATGAAAGTTGCGGTCGAATTGTTGCAGCAGCAAAAAGTGTCGGTGATGCATGCGTAA 2951 Query 105992 ACAAACCTTTCGATAACGCTTCGTATGTTTCCAGGACGTGATCAATATCGTGTCCATGAA 106051 | || | || ||| | | ||| ||||| | || ||| ||||| | ||||||| Sbjct 2952 AAAATCTTTCCGACAGATAGTTGTAGGTTTCAATTGCGGAATCTATATCATCACCATGAA 3011 Query 106052 TACCAATAGCGACGCGCATATAGAGATATTGGGGTGTTTCAATAATTTCACCGTCAATTT 106111 |||| |||| || | ||| | | | || ||| ||||| |||| |||| |||| Sbjct 3012 TACCTATAGACACCCTCATCAACATGTGCTGAGGTCTTTCAGCGATTTTGCCGTTGATTT 3071 Query 106112 TCTGGAGATACCCTTTTTCAAGTGTTTTTAAACCAAAATACCCAAACTCAAAATCACGTT 106171 || | ||| |||||||||||| || |||||||| | |||||||||| | Sbjct 3072 TCAATAAATAAGACCGTTCAAGTGTTTTAAATCCAAAATAATTGTAGCCAAAATCACGAT 3131 Query 106172 C 106172 | Sbjct 3132 C 3132 >seq16914 Length=4992 Score = 138 bits (152), Expect = 1e-27 Identities = 491/762 (64%), Gaps = 8/762 (1%) Strand=Plus/Minus Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||||| |||||| || ||||| || || ||||| | || | |||||| || Sbjct 3301 CGGAACAGGTCCATGTTCATCTCCTCGAAGCGGGCACGCGAGATCTTCGCATAGAAGTCG 3242 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 || ||||||| || | |||||| || |||| | | | | || || ||||| || Sbjct 3241 ACACCGTCGTGCAAGGCATCAATCTCGATGGAGGCCTCCGAGCTGGACGACAACGTGCGT 3182 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 || || ||||| || || || || | || || || || ||| || ||| | || Sbjct 3181 TTGGCACGCTCGCAGGCGGTGCGCAGCCGGCGCAGAGCCCGCACATTCTTGGACACGTCA 3122 Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCT 7465 ||| | || || || |||||||| ||| || | || | ||||| || Sbjct 3121 AGCTTGTTCTTGCGCTTGAACTCTTCGACGAAATGATTCACCAGACGATTGTCGAAGTCC 3062 Query 7466 TCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTC---A 7522 || ||||||| || || || |||||||| | || || || | || || | Sbjct 3061 TCGCCACCCAGATGGGTGTCGCCCGCGGTGGAGCGCACCTCGAACAGGGGCCCCTCTGAA 3002 Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTA 7582 ||| | | || || || || || || || |||| || || || | |||||| | Sbjct 3001 ATGGACAGAACGGAGACGTCGAAAGTGCCGCCGCCCAAATCGAAGATCAACACGTTCTTC 2942 Query 7583 TCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATA 7642 || || | | ||| || || || || |||| || ||||| || ||||| || || Sbjct 2941 TCCTCCTTCAGATGCTTGTCCAGGCCATAGGCGAGGGCGGCCGCTGTCGGTTCGTTGATG 2882 Query 7643 ATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGA 7701 || || || ||| ||||| || ||||| || ||||||| || || || || || || || Sbjct 2881 ATGCGCAACACA-TTCAGACCGGCAATGGTGCCCGCATCCTTGGTGGCCTGACGCTGAGA 2823 Query 7702 ATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGA 7761 ||||| ||||| || || ||||| | ||| || || |||| | || | | || Sbjct 2822 GTCGTTGAAGTACGCGGGCACCGTGATGACGGCATCGCTGACGGTGCCCCCCAAAAACAC 2763 Query 7762 TTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTG 7821 || || | || |||||| || || |||||||| ||||| || | || || | Sbjct 2762 CTCGGCCGTTTCGCGCATTTTCGTCAGCACCATCGAGCTGATCTCCTCGGGGGCGAAACG 2703 Query 7822 TTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAAC 7881 ||| ||| || || || || || || ||| |||| || || ||| || ||| || Sbjct 2702 CTTCAGTTCCCCCTTGAACTCCACCTCGATCTTGGGCTTG-CCACAGT--CGTTGATCAC 2646 Query 7882 CTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGAT 7941 | | ||| | ||||| |||||||||| | ||| || || | || || Sbjct 2645 GCGGAAGGGCCAGTGCTTCATGTCGTCTTGGATTTTCGTGTCGTCGAATTTGCGGCCAAT 2586 Query 7942 AAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGC 7983 | |||||| ||||| || || ||||| |||||||||||||| Sbjct 2585 CAAACGCTTCGCATCGAACACCGTGTTCTTGGGGTTCATGGC 2544 Score = 95.1 bits (104), Expect = 2e-14 Identities = 126/172 (73%), Gaps = 5/172 (3%) Strand=Plus/Minus Query 7988 TGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGAT 8047 |||||||| || ||||| || || ||||| || | | | | ||||| || || | | Sbjct 1831 TGGTTCTTGGCGGCGTCGCCAATCAGACGCTCGCTGTCGT---TGAACGCCACATA-GCT 1776 Query 8048 GGG-GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGAC 8106 ||| || || || || || |||||||| || || || || || || ||| |||||||| Sbjct 1775 GGGCGTTGTGCGGTTGCCCTGGTCGTTGGCGATGATCTCGACTTTGTTGTTCTGCCAGAC 1716 Query 8107 GCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCATT 8158 ||||| ||||||||||| || || || |||||||| || ||| | ||| || Sbjct 1715 ACCGACACACGAATACGTGGTGCCCAAGTCAATACCAATAGCTGGGGTCTTT 1664 >seq17051 Length=1733 Score = 129 bits (142), Expect = 7e-25 Identities = 245/355 (69%), Gaps = 7/355 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || || ||||||| || || || || ||| || || || || | || Sbjct 446 TCGAAGTCCTCGCCACCCAGATGGGTGTCGCCGTTGGTGGCCACCACCTCGAACACCCCG 387 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||| | | || || ||||| || || || || |||| || || | | || Sbjct 386 TTGTCGATGGTCAGCAGGGACACATCGAAAGTGCCGCCGCCCAAATCGAACACCAACACA 327 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| | ||| | || || ||| || | |||||| ||||| ||||||||||| || || Sbjct 326 TTCTTCTCGCCCTCCTT---CTTGTCCAAACCGTAAGCGATGGCCGCCGCCGTCGGCTCG 270 Query 7637 TTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTC 7694 || || || || | ||| || ||||| || || | ||| |||||||| || || || | Sbjct 269 TTGATGATGCGCATCACA-TTGAGGCCCGCGAT-GACGCCGGCATCTTTGGTGGCCTGAC 212 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 | || | ||||| ||||| ||||| ||||| || ||||| | ||||| |||| || | Sbjct 211 GCTGGGCGTCGTTGAAGTACGCCGGCACCGTGACCACCGCATGGGTGACCGTCTTGCCCA 152 Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 |||||| || ||| | || ||||| ||||| || ||||| | || ||||| || Sbjct 151 GATACGCCTCGGCGGTCTCCTTCATCTTGGTCAGCACCATGGCGGAGATCTCCTC 97 >seq231 Length=10750 Score = 102 bits (112), Expect = 1e-16 Identities = 207/304 (68%), Gaps = 5/304 (2%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||||||||| ||||| || || || || ||| | || || || | || Sbjct 6651 ATCGAAATCTTCACCGCCCAAATGGGTGTCGCCGTTGGTGGACACCACCTCGAACACGCC 6592 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || ||| | | || ||| ||||| || || ||||| |||| || || | | || Sbjct 6591 GTTGTCGATGGTCAGCAGCGACACATCGAAGGTGCCACCGCCCAAATCGAAGACCAACAC 6532 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 ||| | ||| | || ||||| || | ||||| ||||| |||||||| || || || Sbjct 6531 ATTCTTCTCGCCCTC---CTTCTTGTCCAAGCCGTAGGCGATGGCCGCCGCGGTCGGCTC 6475 Query 7636 ATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 || || ||||| | ||| |||||||| || || | || || || || || || | Sbjct 6474 GTTGATGATACGCATCACA-TTCAGGCCGGCGATCACGCCAGCGTCCTTGGTGGCCTGAC 6416 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 |||| | ||||| |||||||| || ||||| || || || | ||||| | || || | Sbjct 6415 GTTGGGCGTCGTTGAAGTAGGCGGGCACCGTGACCACGGCATGGGTGACCGTTTTGCCCA 6356 Query 7755 GATA 7758 |||| Sbjct 6355 GATA 6352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634869489819440