Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_014792.1 Length=169285 Score E Sequences producing significant alignments: (Bits) Value seq3187 116 4e-21 >seq3187 Length=10884 Score = 116 bits (128), Expect = 4e-21 Identities = 136/182 (75%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 141363 TGAACACCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCCCTTGTTGTTCTTCAGA 141422 || ||||| ||||||||||| | | ||||| ||||||| || |||||| ||||| Sbjct 7525 TGCACACCGTAGTCCATATGGCGAACTCGGTTACCTTCAACCCCGCGGTTGTTTTTCAGG 7584 Query 141423 ACGAGTAAATTTTCAACTTCCAAATGCCATAAAGG--ATAATAAGCAGTAGCAGCGCCGC 141480 || | | |||||||||| | ||||| | || | |||||| |||||||| || | Sbjct 7585 ACTAACAGGCTTTCAACTTCAAGGTGCCAAATTGGGTAAAATAAG--GTAGCAGCACCAC 7642 Query 141481 CACGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATGTTTCCAGAACGGAA 141540 |||||| |||||||| || || |||||||| || || ||||| || || ||||||||| Sbjct 7643 CACGGACACCACCTTGAGAGCAAGATTTAACCGCAGTCTGGAAGTGCTTGTAGAACGGAA 7702 Query 141541 TA 141542 || Sbjct 7703 TA 7704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541359472813200