Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq3053 131 4e-25 >seq3053 Length=25279 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || || | || ||||| |||||||| || ||||||| | || | |||||||| Sbjct 10172 AACCAGATGTAATGTTGACTCCTTTTGAATGTTATAATCGGACAATGTACGTCCATCTTC 10113 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 | ||||| || || || || || |||||||| ||||||||||| || |||||||| || Sbjct 10112 TAATTGCTTTCCAGCAAAAATTAGACGTTGTTGATCTGGAGGAATTCCCTCTTTGTCCTG 10053 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || || || ||||| || ||||||||| ||| || || | ||| | ||||| Sbjct 10052 AATCTTGGCTTTCACATTCTCGATTGTGTCCGAAGGTTCGACCTCTAAGGTGATGGTCTT 9993 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || || | |||||||| || | ||||||| Sbjct 9992 CCCCGTGAGGGTTTTTACAAAGATCTGCATTT 9961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109010137582322