Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_016158.1 Length=49576 Score E Sequences producing significant alignments: (Bits) Value seq13007 113 1e-20 >seq13007 Length=9541 Score = 113 bits (124), Expect = 1e-20 Identities = 146/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 26055 TTGTGTCGTATTTGTGTCATGGT-TGCCAAAAATGGCATCAATTTTCCGTGCGTGTTCGC 26113 ||||| | |||||||||||| || || || | | || || ||| ||| ||||| Sbjct 9344 TTGTGCCATATTTGTGTCATCGTGTGACATTAGCT-CGTCGATCTTCATTGCATGTTCAG 9402 Query 26114 TTAAGTGGTTCGGTGCCAGGTGAGCGTATCGACGTACCATTTCGATGGACTCCCAGCCGC 26173 ||| || ||||| || | ||||| || | | |||||||| || || ||||| || | Sbjct 9403 TTAGATGATTCGGCGCTAAATGAGCATACCTTCTCACCATTTCTATTGATTCCCATCCTC 9462 Query 26174 CCATTTCTTGCAGAACTGACAACGGAACGCCGGACTGAATTAACCAGCTCGCCCAGGTAT 26233 |||||||||| || | || || ||||| |||||||||| | ||| |||||||| |||| Sbjct 9463 CCATTTCTTGAAGTGCAGATAATGGAACTCCGGACTGAACAAGCCAACTCGCCCAAGTAT 9522 Query 26234 GCCGGAGGTCATGAAAACG 26252 ||| | ||||||||| || Sbjct 9523 GCCTCAAGTCATGAAATCG 9541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158459166862296