Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_016562.1 Length=132662 Score E Sequences producing significant alignments: (Bits) Value seq32885 91.5 1e-13 >seq32885 Length=1417 Score = 91.5 bits (100), Expect = 1e-13 Identities = 119/164 (73%), Gaps = 3/164 (2%) Strand=Plus/Plus Query 40637 AAATTCTCTCTACCAAATATCTCATCCATAAGTACTTTTAAATACGCTTGCTCGTTATCA 40696 ||||| ||||||||||| || |||||||| | | | | || | | || || || ||| Sbjct 844 AAATTATCTCTACCAAAAATATCATCCATTAAAAATCTCAATGATGAGTGTTCTTTGTCA 903 Query 40697 TCACATTGAACGAATATAACACCATCATCTTTTAAAAATTCTCTAGCTACTTCTAATCTT 40756 ||||| ||||| |||||||| || ||||| |||| |||||| | |||||| | || Sbjct 904 TCACAGTGAACAAATATAACTCCGTCATCACTTAATAATTCTTTTGCTACTGAAAGCCTA 963 Query 40757 TCTTTCATAAATTTTAACCAAACTTTAGAACCTATGAATTTATC 40800 | || |||||| ||| ||| | | |||| |||||||||| Sbjct 964 TTCTTAATAAATGTTAGCCA---TGTGGAACGATTGAATTTATC 1004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424222055597698