Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_018087.3 Length=166687 Score E Sequences producing significant alignments: (Bits) Value seq3187 82.4 8e-11 >seq3187 Length=10884 Score = 82.4 bits (90), Expect = 8e-11 Identities = 98/131 (75%), Gaps = 4/131 (3%) Strand=Plus/Plus Query 139911 AATTTCTTTATTTGCAACTACGCCATCAAAAATTTTAGATGGGTCAG--AATATAAGTTA 139968 |||||||| |||| |||| | | |||||||| | | |||||| | ||| ||| Sbjct 5680 AATTTCTTCATTTTCAACGATATCGTCAAAAATAATCGCCGGGTCATTCACGATA--TTA 5737 Query 139969 CGAATAATATGTGTGTATGACCGAGAGTGAATAGTTTCAGAGAACGTCCACGTGACCAAC 140028 || |||||||| |||||||| || ||||| || ||||||||||| | ||| || ||| | Sbjct 5738 CGGATAATATGAGTGTATGAACGTGAGTGGATGGTTTCAGAGAATGCCCATGTTTCCACC 5797 Query 140029 CAAGTTTCAAG 140039 || ||||| || Sbjct 5798 CAGGTTTCCAG 5808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533049319423920