Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_019501.1 Length=39646 Score E Sequences producing significant alignments: (Bits) Value seq6483 80.6 7e-11 >seq6483 Length=21038 Score = 80.6 bits (88), Expect = 7e-11 Identities = 121/172 (70%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 4174 CCACCAAGCATTTGCATGGTTCCACCAACGCCCACGATGACTTCGGTAGTGAACCTATCC 4233 ||||| | ||||||||| | || |||| | ||| | ||||| || ||| | | ||| Sbjct 10059 CCACCTAACATTTGCATTGAGCCGCCAATGTTCACAACCACTTCAGTTGTGTAGCGATCT 10000 Query 4234 TGTCCGCTTTGATCCTGCCATTTTCTTGTCCGCAATTTTCCTTCAAGATAAACCTCAGAG 4293 || ||||||||||| |||||||| | || |||| ||||| | ||| || | || Sbjct 9999 TGACCGCTTTGATCTTGCCATTTACGCGTTTGCAAAGAACCTTCGATATAGACTTGTGAA 9940 Query 4294 CCTTTTCGCAGATATTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATTACCA 4345 |||||| ||| ||||| | |||| ||| || | || ||| ||||||| Sbjct 9939 CCTTTTTTCAGGTATTCACCTGCAACTTCAGCTAACTTTCCGAAAATTACCA 9888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126695681720736