Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_019538.1 Length=231743 Score E Sequences producing significant alignments: (Bits) Value seq3187 86.0 9e-12 >seq3187 Length=10884 Score = 86.0 bits (94), Expect = 9e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 119939 GTTATTCTTCAATACAAGCAGTTTCTCAACCTCCAAATGCCACATAGGGTAATTCAGAGT 119998 ||| || |||| || | ||| | ||||| || | ||||| || |||||| | || Sbjct 7572 GTTGTTTTTCAGGACTAACAGGCTTTCAACTTCAAGGTGCCAAATTGGGTAAAATAAGGT 7631 Query 119999 AGCAGAGCCGCCACGTAGAGCACCTTGCGAACAGCTCTTAACCGCAGTATGGAAGTGCTT 120058 ||||| || ||||| | | ||||||| || || ||||||||||| ||||||||||| Sbjct 7632 AGCAGCACCACCACGGACACCACCTTGAGAGCAAGATTTAACCGCAGTCTGGAAGTGCTT 7691 Query 120059 GTAGAATGGGATTACGCCGGTATGGGTTGCTTCGCCG 120095 |||||| || || ||| || ||| ||||| ||| Sbjct 7692 GTAGAACGGAATACAGCCTGTGTGGAAAGCTTCACCG 7728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741142213532080