Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_019714.1 Length=39026 Score E Sequences producing significant alignments: (Bits) Value seq13007 120 8e-23 >seq13007 Length=9541 Score = 120 bits (132), Expect = 8e-23 Identities = 152/202 (75%), Gaps = 8/202 (4%) Strand=Plus/Plus Query 20989 TTGTGCCGTATTTGTGCCAT--TGCGACTTATAATCGCATCGATTTTGCTCGCGTGCTCG 21046 ||||||| |||||||| ||| || ||| || | | | ||||| || | || || || Sbjct 9344 TTGTGCCATATTTGTGTCATCGTGTGAC--ATTAGCTCGTCGATCTTCATTGCATGTTCA 9401 Query 21047 GTGAGATGCC-CGGCTGAAAGGTGGGCGTATCTTTGAACCATTTCGAGAGTTTCCCATCC 21105 || ||||| |||| || || || || ||| |||||||| | | ||||||||| Sbjct 9402 GTTAGATGATTCGGCGCTAAA-TGAGCATACCTTCTCACCATTTCTATTGATTCCCATCC 9460 Query 21106 TCCCATCTCTTTAAGTGCA-AGAAGAGAGACTCCAGACTGAACCAGCCAGCTTGCCCAGG 21164 |||||| |||| ||||||| | || || ||||| |||||||| ||||| || ||||| | Sbjct 9461 TCCCATTTCTTGAAGTGCAGATAATGGA-ACTCCGGACTGAACAAGCCAACTCGCCCAAG 9519 Query 21165 TATGCCTCAAGTCATGGAATCG 21186 |||||||||||||||| ||||| Sbjct 9520 TATGCCTCAAGTCATGAAATCG 9541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124712463111696