Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_019719.1 Length=41528 Score E Sequences producing significant alignments: (Bits) Value seq6146 109 1e-19 >seq6146 Length=11763 Score = 109 bits (120), Expect = 1e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27447 TCGCGCACTGTCTTGCGGTTGGCATCAATTAGCTTTGGAATTTCCTTCAGTTCAGCAACA 27506 || ||||| || ||| ||||| || ||||||||||| ||||| || | || || || Sbjct 2346 TCTCGCACAGTTCGGCGATTGGCGTCGATTAGCTTTGGTATTTCTTTTAACTCTGCTACC 2287 Query 27507 AGGTCTTTGCCAAGACCATCGAGATATGTTTTCGTCTGCGCAACTTTATACGCCAGAGAA 27566 | |||||| || || ||||| || || ||||| | || || ||||| || |||| ||| Sbjct 2286 AAGTCTTTACCGAGCCCATCAAGGTAAGTTTTTGATTGAGCGACTTTGTAGGCCAATGAA 2227 Query 27567 GCGATCTCCTTTCTGCCCTTTGCCGTTGTGATATCAGGCACAAAGGACATAACTTCACGT 27626 || || ||||| | || || | || |||| |||||| | ||| || ||||||| | Sbjct 2226 GCAATTTCCTTGCGACCTTTAACAGTGGTGACATCAGGAATAAAAGAATTAACTTCTTGC 2167 Query 27627 TCAACCTTTTGAAGGATTTCTTC 27649 || || || ||| ||| ||||| Sbjct 2166 TCTACTTTACGAATGATATCTTC 2144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132715709821080