Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_019909.1 Length=168809 Score E Sequences producing significant alignments: (Bits) Value seq3187 122 9e-23 >seq3187 Length=10884 Score = 122 bits (134), Expect = 9e-23 Identities = 153/207 (74%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 146568 TTGAACACCATAATCTAGGTGGCGAATACGGTTTTCATCAACACCTTTATTGTTCTTCAG 146627 ||| ||||| || || | ||||||| ||||| | ||||| || ||||| ||||| Sbjct 7524 TTGCACACCGTAGTCCATATGGCGAACTCGGTTACCTTCAACCCCGCGGTTGTTTTTCAG 7583 Query 146628 TACGAGCAGGTTTTCTACTTCAAGATGCCAAATCGGATAATACAAAGTAGCTGCACCGCC 146687 || | |||| |||| |||||||| |||||||| || ||| | || ||||| ||||| || Sbjct 7584 GACTAACAGGCTTTCAACTTCAAGGTGCCAAATTGGGTAAAATAAGGTAGCAGCACCACC 7643 Query 146688 ACGAATGCCGCCTTGAGAACAAGATTTAACAGAAG-CT--AAGTGAGTTTTCCAGAATGG 146744 ||| | || |||||||| ||||||||||| | || || ||||| || |||| || Sbjct 7644 ACGGACACCACCTTGAGAGCAAGATTTAACCGCAGTCTGGAAGTG---CTTGTAGAACGG 7700 Query 146745 AATAACGCCTGTATGACGAACTTCACC 146771 |||| |||||| || | ||||||| Sbjct 7701 AATACAGCCTGTGTGGAAAGCTTCACC 7727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539836904293840