Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_021534.1 Length=47552 Score E Sequences producing significant alignments: (Bits) Value seq6497 122 3e-23 >seq6497 Length=13545 Score = 122 bits (134), Expect = 3e-23 Identities = 246/365 (67%), Gaps = 0/365 (0%) Strand=Plus/Plus Query 36971 GTTACGCGAGCGGCATCACAGATGGTCTGGATTCGCTCACCAATGGACTTATCCTCATCG 37030 ||||| | |||| || |||||| |||| ||| |||| ||||| ||| ||||||||||| Sbjct 11616 GTTACCCTTGCGGAATTACAGATAGTCTCGATGCGCTGACCAAGGGAAATATCCTCATCG 11675 Query 37031 TCAAAGGTGTAATCAAAGTACCCAAGACGCTCATCAGGCAGCGCATCAGCTATTTCATAT 37090 || || |||||||| ||||| || || ||||||||||||| ||| ||| |||| Sbjct 11676 TCGAATGTGTAATCGAAGTAACCTAGTCGCTCATCAGGCAAGCTATCGTAAATTCGATAT 11735 Query 37091 AATCTTCCCACGTCAATCGTGCTTTCAGGCTGACCAGCAGTAATAAGCCAGTTATGCAGC 37150 | | | | ||| || | | || | ||| || ||||| | ||| | |||| Sbjct 11736 AGCCCGTCGATGTCGATATTCTTCTCGCTTTCACCTGCGGTAATTAACCATGTGTGCAAT 11795 Query 37151 ACTGAATCTGCAAAACTTCTTGATGGTGTTAACGTATAGTCTACTGTCCCGGTTGTTCTG 37210 || | ||| |||||||| | |||||| | | ||| || || || | | | || | Sbjct 11796 ACGGCATCAGCAAAACTCCGTGATGGCCTGAGCGTGTAATCAACCTGCTTTGATACTCGG 11855 Query 37211 TTATATCCGATAGTCCAGCGGGTGATCAGCGCATTATATTTGCGCTCAGTAACTGATGTG 37270 | |||| ||| | ||| ||| ||| |||||||||||||| | || ||| Sbjct 11856 TCATATGAAATAACCATGCGCGTGGCCAGTAAGTTATATTTGCGCTCTCTTGCTCCTGTA 11915 Query 37271 GGCTGAAGCGTGGCCTTCACCGTGACTTTAACAAGGGTGTCATCAGGATAAACTACATTC 37330 ||| |||||| |||| | || ||||||| ||||||| | |||| |||||| Sbjct 11916 GGCGCTTCAGTGGCCCTCACTGACACATTAACAATCGTGTCATTCTCAAAAACGACATTC 11975 Query 37331 TCGCG 37335 || || Sbjct 11976 TCACG 11980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151984917725688