Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq2999 141 3e-29 >seq2999 Length=19333 Score = 141 bits (156), Expect = 3e-29 Identities = 258/373 (69%), Gaps = 6/373 (2%) Strand=Plus/Minus Query 37141 AAAGAAAATCACTTCGGCGCAAACGTGCTGGTTACCCGCAAAGGTGCTGTTCGGGCCCGC 37200 ||||| | || || || | | | || |||| || || ||||| ||||| || || Sbjct 15067 AAAGAGCAACATTTTGGTGAAGAAGTTTTGGTAACACGAAAAGGCGCTGTGTCTGCTCGA 15008 Query 37201 GAGGGCGACCTGGGCATCATCCCTGGCTCGATGGGTGCGAAGTCATTCATCGTTCGCGGC 37260 | ||| | |||| ||||| || || |||||||| || || || || || ||||| Sbjct 15007 AAAGGCCAAATGGGGATCATTCCAGGGTCGATGGGGGCAAAAAGCTTTATTGTGCGCGGA 14948 Query 37261 AAGGGAAATTCCGAATCGTTCTGCTCTTGCAGCCACGGTGCCGGTCGAATGATGAGCCGG 37320 || || ||| || |||||||||||||||||||| || || |||||||||| Sbjct 14947 CTCGGTGATGAAGAAAGTTTTTGCTCTTGCAGCCACGGTGCAGGCCGTGTGATGAGCCGA 14888 Query 37321 GCCGAAGCAAAACGCCGGTTCACAGTCGAG-GATCATGAGGCGGCCAC--CAAAGGTATC 37377 | ||||| ||| || ||| | || ||| || || | ||| || | | || Sbjct 14887 ACGGAAGCCAAAAAGCGTTTCTCTGT-GAGCGACCAGAAAATGGCAACTGCGCACGTT-- 14831 Query 37378 GAGTGCCGCAAAGATGCCGAAGTGATCGACGAGACGCCAGCGGCTTACAAGGACATCGAT 37437 || ||||| |||||| ||| ||||| || || | || ||| ||||| ||||||||| Sbjct 14830 GAATGCCGAAAAGATAGCGATGTGATTGATGAAATTCCGATGGCATACAAAGACATCGAT 14771 Query 37438 GCGGTCATGGCCGCGCAATCCGCCCTGGTGGACATCGTGCACACGCTGCGCCAAGTCGTT 37497 || || ||||| |||||||| | | || || |||||||| || || |||||||| || Sbjct 14770 GCCGTAATGGCAGCGCAATCATCATTAGTTGAAATCGTGCATACCCTACGCCAAGTGGTG 14711 Query 37498 TGCGTGAAGGGTT 37510 || ||||| |||| Sbjct 14710 TGTGTGAAAGGTT 14698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139228343833992