Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_023568.1 Length=246964 Score E Sequences producing significant alignments: (Bits) Value seq3187 167 4e-36 >seq3187 Length=10884 Score = 167 bits (184), Expect = 4e-36 Identities = 152/189 (80%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 78865 CACACTGG-TGTAATTCCATTCTGGAAACACTTTCAAACTGCGGTTAAATCGTGTTCTCA 78923 ||||| || |||| |||| |||| || ||||| || |||||||||||||| || ||||| Sbjct 7715 CACACAGGCTGTA-TTCCGTTCTACAAGCACTTCCAGACTGCGGTTAAATCTTGCTCTCA 7657 Query 78924 AGGTGGTGTACGTGGGGGTGCTGCGACTCTAACTTACCCGATTTGGCACTTAGAAGTTGA 78983 ||||||||| ||||| |||||||| || || |||||| ||||||||| | |||||||| Sbjct 7656 AGGTGGTGTCCGTGGTGGTGCTGCTACCTTATTTTACCCAATTTGGCACCTTGAAGTTGA 7597 Query 78984 AAAACTGTTAGTTCTGAAGAACAACAAAGGTGTTGAAGAAAACCGTATTCGTCATCTTGA 79043 || |||||||| ||||| |||||| || ||||||| ||||| |||| ||| | || Sbjct 7596 AAGCCTGTTAGTCCTGAAAAACAACCGCGGGGTTGAAGGTAACCGAGTTCGCCATATGGA 7537 Query 79044 CTACAGTGT 79052 |||| |||| Sbjct 7536 CTACGGTGT 7528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 789829220744640