Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_023734.1 Length=35725 Score E Sequences producing significant alignments: (Bits) Value seq23044 134 3e-27 >seq23044 Length=7840 Score = 134 bits (148), Expect = 3e-27 Identities = 300/443 (68%), Gaps = 7/443 (2%) Strand=Plus/Plus Query 15149 GGCATGAAGTATAACGGCGTGACCATGAACCCAGAAGCGGCGCAAATGCTTGAGACGCGA 15208 |||||||| || ||| || || ||||| || ||||| || |||||| | || | | Sbjct 3675 GGCATGAAATACAACAATGTCACTATGAATCCTGAAGCAGCTCAAATGTTAGAAAGTAGG 3734 Query 15209 TCCTTTGAGATTGAGGAAATCTGTCGTTGGTTTCGCGTATCGCCAATTATGATTGGGCAC 15268 | ||| || |||||||| || || |||||||| || | || ||||| |||| || Sbjct 3735 GCTTTTAGTATAGAGGAAATTTGCCGCTGGTTTCGTGTTCCTCCGTTTATGGTTGGTCAT 3794 Query 15269 TTCGATAAGCAAAGCTCATGGGCCGCCTCTGCTGAAGCGCAAGA-CTTACACTTTTTGAA 15327 | ||||| |||||| ||||| || || |||| ||| || | | || ||||| | Sbjct 3795 ATGGATAAACAAAGCAGTTGGGCATCCAGTGTGGAAG-GCATGAACATGCAGTTTTTAAC 3853 Query 15328 ATACACATTTAGACCGCTGCTAGTCAATATTGAGCAAGAGATTTTACGCTGTCTTATCGG 15387 ||||||| || || |||| ||||||||||||||||| || || | || | | Sbjct 3854 GAACACATTGAGGCCATTGCTTGTCAATATTGAGCAAGAAATCAGTCG-TNTCGTTGCTT 3912 Query 15388 AAAAATTGATAGCGACAAGTATTACGTTGAGTTCAATGTCGAAGGCTTACTACGTGCAGA 15447 | || || || | ||||||| |||||| ||||||||| ||||| || ||||| Sbjct 3913 ATTAAGTGGCGATGATGATTATTACGCTGAGTTTTCTGTCGAAGGGTTACTTCGAGCAGA 3972 Query 15448 CAGTAAAACGCGCTCTGAGTACTATTCGTCTGGCCTGAATAACGGCTGGATAAATCGTGA 15507 ||| | || ||| |||||| | | | | || || ||||| | |||| | Sbjct 3973 TAGTGCAGGTCGGGCTGCTTACTATACAACATCATTACAAAATGGTTGGATGAGTCGTAA 4032 Query 15508 CGAAGTCCGGTCTAAAGAGAATATGCCGCCAATTGACGGCGGTGATAAGTACACAATTCA 15567 || || || | || ||| | ||||| ||||| || ||||||| |||||| |||| Sbjct 4033 TGATGTGAGGCGTCTTGAAAATTTACCGCCCATTGATGGTGGTGATATTTACACAGTTCA 4092 Query 15568 A-TCAGCACTTATC-CCGCTTGA 15588 | ||| ||||| | ||| |||| Sbjct 4093 ACTCA--ACTTAACTCCGATTGA 4113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114153423388404