Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq9178 86.0 7e-12 >seq9178 Length=5021 Score = 86.0 bits (94), Expect = 7e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 21743 CGCATACCCGAAATAGGCGACAAGTTCTGTTC-CGGCATGGCCCAGAAAGGCACCTGCGG 21801 |||||||| | || |||||||||||| ||| || || || | ||||||| || || || Sbjct 4215 CGCATACCGCAGATCGGCGACAAGTTCGCTTCGCGTCACGGTC-AGAAAGGTACGTGTGG 4157 Query 21802 GATGATCTATTCGCAAGAAAACATGCCATTCACATCTTCCGGCATGACCCCCGACATCAT 21861 || || |||||| | ||| | ||||||| ||| || ||||||||||||| Sbjct 4156 TATTCAGTACCGGCAAGAGGATATGGCGTTCACATGCGAAGGCCTGGCCCCCGACATCAT 4097 Query 21862 CATCAACCCCAACTGCATTCCCTCCAGAATGACCAT 21897 |||||| ||| || |||||| ||| | ||||| || Sbjct 4096 CATCAATCCCCACGCCATTCCATCCCGTATGACAAT 4061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521329380232880