Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq3053 149 1e-30 >seq3053 Length=25279 Score = 149 bits (164), Expect = 1e-30 Identities = 163/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| ||||| | || | || || || || || || |||||||| || | | | || Sbjct 10178 ACGAAGAACCAGATGTAATGTTGACTCCTTTTGAATGTTATAATCGGACAATGTACGTCC 10119 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||||||| ||| ||||||||||| ||||| | ||||||||||||||| ||||| || || Sbjct 10118 ATCTTCTAATTGCTTTCCAGCAAAAATTAGACGTTGTTGATCTGGAGGAATTCCCTCTTT 10059 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || |||||||| ||||| ||||| || || || || |||||| || || || || || Sbjct 10058 GTCCTGAATCTTGGCTTTCACATTCTCGATTGTGTCCGAAGGTTCGACCTCTAAGGTGAT 9999 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||||| || || | || |||||||| ||||||||| Sbjct 9998 GGTCTTCCCCGTGAGGGTTTTTACAAAGATCTGCATT 9962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981409982963274