Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq3053 114 8e-21 >seq3053 Length=25279 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | | ||| | |||| ||||| || ||| ||||| ||||| ||||||| Sbjct 10191 CACCACCACGAAGACGAAGAACCAGATGTAATGTTGACTCCTTTTGAATGTTATAATCGG 10132 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | ||| ||| | || || ||||| ||||| |||||||| | ||| || |||||| | | Sbjct 10131 ACAATGTACGTCCATCTTCTAATTGCTTTCCAGCAAAAATTAGACGTTGTTGATCTGGAG 10072 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | || |||||||| ||| || ||||| ||| || | ||||| | ||| Sbjct 10071 GAATTCCCTCTTTGTCCTGAATCTTGGCTTTCA-CATTCTCGATTGTGTCCGAAGGTTCG 10013 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| || || || || | |||||||||||||||||||| Sbjct 10012 ACCTCTAAGGTGATGGTCTTCCCCGTGAGGGTTTTTACAAAGATCTGCAT 9963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328571134350720