Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_027996.1 Length=175720 Score E Sequences producing significant alignments: (Bits) Value seq32885 163 3e-35 >seq32885 Length=1417 Score = 163 bits (180), Expect = 3e-35 Identities = 209/288 (73%), Gaps = 0/288 (0%) Strand=Plus/Minus Query 8027 TAATTTATTAATAAAAGGTGACAATTTAATTGGCTTACATTCTTTAAAAAAGAAATTTGT 8086 ||||||| | || ||||| ||||| |||||| ||| ||| | | ||||| | ||| | Sbjct 1131 TAATTTAATTATCAAAGGAAACAATCTAATTGCATTATATTGTCTGAAAAAAAGATTCAT 1072 Query 8087 GAATAAAGTTAAACTTATCTATATTGACCCACCTTATAATACAGGCAATACTAGTTTTAA 8146 ||| |||||| | || || || ||||| || ||||| || || ||| |||||| | Sbjct 1071 TAATTCAGTTAAGTTAATTTACATAGACCCGCCATATAACACTGGAAATGATAGTTTCAG 1012 Query 8147 TTATAACGACAAATTTAAACACACTACTTGGCTTACTTTTATGAAAAATCGCCTTGAAAT 8206 ||||| || ||||| || | | || ||||| || ||||| || ||| | ||| | | Sbjct 1011 ATATAATGATAAATTCAATCGTTCCACATGGCTAACATTTATTAAGAATAGGCTTTCAGT 952 Query 8207 TGCTAGAGAATTTTTAAGAGATGATGGTGTAATATTCGTTCAATGTGACGATAATGAACA 8266 || | |||||| ||||| ||||| || || ||||| ||||| ||||| || || ||||| Sbjct 951 AGCAAAAGAATTATTAAGTGATGACGGAGTTATATTTGTTCACTGTGATGACAAAGAACA 892 Query 8267 AGCATATTTAAAAGTACTTATGGATGAGATATTTGGTAGAGAGAATTT 8314 ||| || | | | | |||||||| || ||||||||||| ||||| Sbjct 891 CTCATCATTGAGATTTTTAATGGATGATATTTTTGGTAGAGATAATTT 844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561942935884800