Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_028829.1 Length=248088 Score E Sequences producing significant alignments: (Bits) Value seq3187 172 9e-38 >seq3187 Length=10884 Score = 172 bits (190), Expect = 9e-38 Identities = 153/189 (81%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 236260 ACACTGTAGTCAAGATGACGAATACGGTTTTCTTCAACACCTTTGTTGTTCTTCAGAACT 236319 |||| |||||| | ||| |||| ||||| ||||||| || |||||| ||||| ||| Sbjct 7528 ACACCGTAGTCCATATGGCGAACTCGGTTACCTTCAACCCCGCGGTTGTTTTTCAGGACT 7587 Query 236320 AACAGTTTTTCAACTTCTAAGTGCCAAATCGGGTAAGTTAGAGTCGCAGCACCACCACGT 236379 ||||| |||||||||| | ||||||||| |||||| || || |||||||||||||| Sbjct 7588 AACAGGCTTTCAACTTCAAGGTGCCAAATTGGGTAAAATAAGGTAGCAGCACCACCACGG 7647 Query 236380 ACACCACCTTGAGAACACGATTTAACCGCAGTTTGAAAGTGTTTCCAGAATGGAATTACA 236439 |||||||||||||| || |||||||||||||| || ||||| || |||| |||| |||| Sbjct 7648 ACACCACCTTGAGAGCAAGATTTAACCGCAGTCTGGAAGTGCTTGTAGAACGGAA-TACA 7706 Query 236440 -CCAGTGTG 236447 || ||||| Sbjct 7707 GCCTGTGTG 7715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 793424529601280