Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_028881.1 Length=170473 Score E Sequences producing significant alignments: (Bits) Value seq3187 150 2e-31 >seq3187 Length=10884 Score = 150 bits (166), Expect = 2e-31 Identities = 140/176 (80%), Gaps = 4/176 (2%) Strand=Plus/Plus Query 142871 CCGTAGTCCATATGACGAATACGGTTCTCATCAACGCCTTTGTTGTTTTTCAGAACGAGC 142930 |||||||||||||| |||| ||||| | ||||| || |||||||||||| || | | Sbjct 7531 CCGTAGTCCATATGGCGAACTCGGTTACCTTCAACCCCGCGGTTGTTTTTCAGGACTAAC 7590 Query 142931 AGATTTTCAACTTCCAAATGCCAAATAGG--ATAATAAGCAGTAGCAGCGCCGCCACGGA 142988 || |||||||||| | |||||||| || | |||||| |||||||| || ||||||| Sbjct 7591 AGGCTTTCAACTTCAAGGTGCCAAATTGGGTAAAATAAG--GTAGCAGCACCACCACGGA 7648 Query 142989 TTCCACCTTGTGAACATGATTTAACTGCAGTCTGGAAATGCTTCCAGAATGGAATA 143044 |||||||| || || |||||||| ||||||||||| ||||| |||| |||||| Sbjct 7649 CACCACCTTGAGAGCAAGATTTAACCGCAGTCTGGAAGTGCTTGTAGAACGGAATA 7704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545159496764880