Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_028894.1 Length=170336 Score E Sequences producing significant alignments: (Bits) Value seq3187 125 8e-24 >seq3187 Length=10884 Score = 125 bits (138), Expect = 8e-24 Identities = 138/182 (76%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 140775 TGGACACCATAGTCCATATGCCTGATACGGTTTTCTTCAACGCCTTTGTTGTTCTTCAGA 140834 || ||||| ||||||||||| | | ||||| ||||||| || |||||| ||||| Sbjct 7525 TGCACACCGTAGTCCATATGGCGAACTCGGTTACCTTCAACCCCGCGGTTGTTTTTCAGG 7584 Query 140835 ACGAGTAAATTTTCAACTTCCAAATGCCAAATAGG--ATAATAAGCAGTAGCAGCGCCGC 140892 || | | |||||||||| | |||||||| || | |||||| |||||||| || | Sbjct 7585 ACTAACAGGCTTTCAACTTCAAGGTGCCAAATTGGGTAAAATAAG--GTAGCAGCACCAC 7642 Query 140893 CACGGATTCCACCTTGTGAACATGATTTAACAGCCGTTTGGAAATGTTTCCAGAACGGAA 140952 |||||| |||||||| || || |||||||| || || ||||| || || ||||||||| Sbjct 7643 CACGGACACCACCTTGAGAGCAAGATTTAACCGCAGTCTGGAAGTGCTTGTAGAACGGAA 7702 Query 140953 TA 140954 || Sbjct 7703 TA 7704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544721278514560