Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_028925.1 Length=170822 Score E Sequences producing significant alignments: (Bits) Value seq3187 122 1e-22 >seq3187 Length=10884 Score = 122 bits (134), Expect = 1e-22 Identities = 151/205 (74%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 143103 TGGACACCATAGTCCATATGTCTGATACGGTTTTCTTCAACGCCCTTGTTGTTCTTCAGA 143162 || ||||| ||||||||||| | | ||||| ||||||| || |||||| ||||| Sbjct 7525 TGCACACCGTAGTCCATATGGCGAACTCGGTTACCTTCAACCCCGCGGTTGTTTTTCAGG 7584 Query 143163 ACGAGTAAATTTTCAACTTCCAAATGCCATAAAGG--ATAATAAGCAGTAGCAGCGCCGC 143220 || | | |||||||||| | ||||| | || | |||||| |||||||| || | Sbjct 7585 ACTAACAGGCTTTCAACTTCAAGGTGCCAAATTGGGTAAAATAAG--GTAGCAGCACCAC 7642 Query 143221 CACGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATGTTTCCAGAACGGAA 143280 |||||| |||||||| || || |||||||| || || ||||| || || ||||||||| Sbjct 7643 CACGGACACCACCTTGAGAGCAAGATTTAACCGCAGTCTGGAAGTGCTTGTAGAACGGAA 7702 Query 143281 TAACACCAGTATGGCGAACTTCACC 143305 || || || ||| | ||||||| Sbjct 7703 TACAGCCTGTGTGGAAAGCTTCACC 7727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546275833767520