Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_028995.1 Length=43216 Score E Sequences producing significant alignments: (Bits) Value seq12086 95.1 3e-15 >seq12086 Length=38917 Score = 95.1 bits (104), Expect = 3e-15 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 1888 TATGTATTTTCAGGCGATCAAGGTAAACGAGATAGTATTGTTGTTGTAGCGCAATTATCT 1947 ||| |||||||||| || ||||||| || || || ||| |||| || || |||||||| Sbjct 1697 TATTTATTTTCAGGTGAAGAAGGTAAGCGCGACAGCATTATTGTAGTTGCTCAATTATCG 1638 Query 1948 CCTGAATTTACAGCAAGATTAGTAGATCGGTGGCAAGAGCTAGAAAA 1994 |||||||||||||| || |||| || || ||| |||| || ||||| Sbjct 1637 CCTGAATTTACAGCTCGACTAGTTGACCGCTGGAAAGAACTCGAAAA 1591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138115182421176