Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_029013.1 Length=177688 Score E Sequences producing significant alignments: (Bits) Value seq3187 143 3e-29 seq27670 89.7 6e-13 >seq3187 Length=10884 Score = 143 bits (158), Expect = 3e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 77190 TGAACGCCATAATCCAGGTGACGAATACGGTTATTCTCAACACCTTTGTTGTTTTTCAGA 77249 || || || || |||| || |||| |||||| ||||| || |||||||||||| Sbjct 7525 TGCACACCGTAGTCCATATGGCGAACTCGGTTACCTTCAACCCCGCGGTTGTTTTTCAGG 7584 Query 77250 ACCAGCAGGTTTTCAACTTCCAAATGCCAGATCGGATAATACAACGTTGCAGCACCACCA 77309 || | |||| |||||||||| | ||||| || || ||| | || || |||||||||||| Sbjct 7585 ACTAACAGGCTTTCAACTTCAAGGTGCCAAATTGGGTAAAATAAGGTAGCAGCACCACCA 7644 Query 77310 CGAACGCCACCTTGTGAACAGGATTTAACCGCTGTCTGAATATGTTTCCAGAACGGGATC 77369 || || |||||||| || || ||||||||||| ||||| | || || ||||||| || Sbjct 7645 CGGACACCACCTTGAGAGCAAGATTTAACCGCAGTCTGGAAGTGCTTGTAGAACGGAATA 7704 Query 77370 ACGCCTGTATGTACTGCTTCACCACCA 77396 |||||| || | |||||||| ||| Sbjct 7705 CAGCCTGTGTGGAAAGCTTCACCGCCA 7731 >seq27670 Length=3875 Score = 89.7 bits (98), Expect = 6e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 67771 ATAACGTCGCGCTGTTGTTCTGGAGTCAGTGCATTAAAGCGAACTGCGTAACCTGAAACG 67830 |||||||| ||||||||||| |||||||| ||||| || ||||| |||||||| || Sbjct 1488 ATAACGTCTTGCTGTTGTTCTTTAGTCAGTGAGTTAAAACGCACTGCATAACCTGATACA 1547 Query 67831 CGGATCGTTAACTGTGGGTACTTCTCAGGATGTTTCACAGCATCTTCCAGGGTTTCGCG 67889 ||||| || | |||||| || ||||| || | || || || ||| ||| |||| || Sbjct 1548 CGGATAGTCAGCTGTGGATATTTCTCTGGGTTTTCCATCGCTTCTAACAGCATTTCACG 1606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568237925057280