Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_030919.1 Length=42418 Score E Sequences producing significant alignments: (Bits) Value seq13007 116 1e-21 >seq13007 Length=9541 Score = 116 bits (128), Expect = 1e-21 Identities = 115/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 3459 GCATGTTCAGTCAGGTGATTTGGTGCCAGATGAGCATATCGGCGAACCATTTCGATAGAC 3518 ||||||||||| || ||||| || || | ||||||||| | | |||||||| || || Sbjct 9393 GCATGTTCAGTTAGATGATTCGGCGCTAAATGAGCATACCTTCTCACCATTTCTATTGAT 9452 Query 3519 TCCCAGCCACCCATTTCCTGCAATACCGAAATCGGAACGCCAGCCTGAACTAACCAACTT 3578 ||||| || |||||||| || | | | || | ||||| || | |||||| | |||||| Sbjct 9453 TCCCATCCTCCCATTTCTTGAAGTGCAGATAATGGAACTCCGGACTGAACAAGCCAACTC 9512 Query 3579 GCCCACGTGTGCCTCAGGTCATGAAAACG 3607 ||||| || ||||||| ||||||||| || Sbjct 9513 GCCCAAGTATGCCTCAAGTCATGAAATCG 9541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135562588146960