Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_031065.1 Length=159878 Score E Sequences producing significant alignments: (Bits) Value seq3187 127 2e-24 >seq3187 Length=10884 Score = 127 bits (140), Expect = 2e-24 Identities = 136/180 (76%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 132588 TTGCAGACCATAATCTAGATGACGAATACGGTTTTCATCTACACCTTTGTTGTTCTTTAA 132647 ||||| ||| || || | ||| |||| ||||| | || || || |||||| || | Sbjct 7524 TTGCACACCGTAGTCCATATGGCGAACTCGGTTACCTTCAACCCCGCGGTTGTTTTTCAG 7583 Query 132648 TACAAGCAGGTTTTCAACTTCTAGATGCCACATTGGATAATAAAGAGTAGCTGCACCACC 132707 || | |||| |||||||||| || ||||| ||||| ||| | | ||||| |||||||| Sbjct 7584 GACTAACAGGCTTTCAACTTCAAGGTGCCAAATTGGGTAAAATAAGGTAGCAGCACCACC 7643 Query 132708 ACGTACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAAAAAGGAAT 132767 ||| ||||| |||||||| |||||||| || |||||||| || || || | || ||||| Sbjct 7644 ACGGACACCACCTTGAGAGCAAGATTTAACCGCAGTCTGGAAGTGCTTGTAGAACGGAAT 7703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511269552515680