Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq6483 293 2e-74 >seq6483 Length=21038 Score = 293 bits (324), Expect = 2e-74 Identities = 419/595 (70%), Gaps = 19/595 (3%) Strand=Plus/Minus Query 96722 TGGCCGTTAAAAGCCAATCTCACCGTGCCAATTGGGCCATTTCGTTGCTTTCCGATAATT 96781 || |||||||| | ||| || ||||| ||||| || || || |||||||| || | ||| Sbjct 581 TGCCCGTTAAACGTCAACCTTACCGTACCAATCGGCCCGTTACGTTGCTTACCTAAAATA 522 Query 96782 ACCTCGGCAATGCCCTTCATTTCGCTATCCGGGTGATAAACTTCGTCGCGATACAAAAAC 96841 | ||| |||| || || | ||||| | ||| ||||| || || || || | |||| Sbjct 521 ATCTCCGCAACCCCTTTGAGCTCGCTGTTATCGTGGTAAACCTCATCACGGTAGATAAAC 462 Query 96842 ATGATCAGGTCTGCGTCCTGCTCAATTGCTCCTGATTCACGTAAATCTGAATTTACCGGT 96901 ||||| | ||| || |||||||| || | ||||||||||| || || || || || || Sbjct 461 ATGATTAAGTCCGCATCCTGCTCGATAGACCCTGATTCACGCAAGTCGGAGTTAACTGGG 402 Query 96902 CGTTTGTCCGCACGCTGTTCAAGCGATCGATTAAGTTGTGACAATGCCACCACCGGTACT 96961 ||||| |||||||| || ||||| || ||||| || | | || Sbjct 401 CGTTTATCCGCACGTTGCTCAAGGCTACGGTTAAGCTGNCATTAAGC------------- 355 Query 96962 TGTAATTCCTTCGCCAACGCCTTCAGTGAGCGAGAAATCTCGGCAATTTCCAGCGTTCGG 97021 || ||||| || || || || ||||| || |||||||||||||| || || ||| Sbjct 354 ------TCTTTCGCTAAGGCTTTGAGCGAGCGCGAGATCTCGGCAATTTCAAGGGTACGG 301 Query 97022 TTATCTTGCAGCTCCGGGACGCGCATAAGTTGCAGGTAGTCGATCATAATCATGCTCAAA 97081 ||||| ||| || || ||||| | || |||||||| ||||| |||| ||| || Sbjct 300 TTATCGGAGAGCGAAGGAACACGCATTAACTGAAGGTAGTCAATCATGATCAGGCTTAAG 241 Query 97082 CCACCATTTTCTTTATAAACACGACGAGCGCGGGAACGTAGCTCTGTCGGCGTCAGGGCG 97141 ||||| | ||| |||| ||| | || |||||||| | |||||| || ||||| || Sbjct 240 CCACCGTGTTCACGGTAAATACGCCTCGCACGGGAACGCACCTCTGTAGGTGTCAGACCG 181 Query 97142 CTTGAGTCATCAATAAAAATATTCTGCTTGTCCAACAGAATACCCATTGCGCCAGAAACC 97201 |||||||||||| | || || |||| |||| || ||||||||| | | |||| Sbjct 180 GATGAGTCATCAATGTACATGTTGCGCTTTTCCATCAAAATACCCATGGTACTGGAAATA 121 Query 97202 CGCGCCCAATCCTCGTCGTTAAGTTGCCCTGTTCGAATACGAGTCTGATCAACGCGTGCA 97261 ||||||||||| || |||| | ||| || || |||||||| || || |||||||| | | Sbjct 120 CGCGCCCAATCTTCATCGTCTAATTGGCCAGTACGAATACGCGTTTGGTCAACGCGCGAA 61 Query 97262 AGAGAAGCCAGTGAGCGCATCATCAGCTGGTGGCTCGGCATCTCAAGGCTAAAAA 97316 || || || || |||||||| | ||||| | |||||||| | || |||| Sbjct 60 AGTGACGCGAGCATACGCATCATGATCTGGTTACCGGGCATCTCTAAACTGAAAA 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330765447027556