Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq763 87.8 2e-12 seq10189 82.4 9e-11 >seq763 Length=27955 Score = 87.8 bits (96), Expect = 2e-12 Identities = 73/89 (82%), Gaps = 3/89 (3%) Strand=Plus/Minus Query 19274 GGGGACATTTTGAGGGGTAGTAGCTCAGTTGGTTAGAGTACCTGCCTGTCACGCAGGGTG 19333 |||||||| ||| |||||| ||||||||||||| |||||||||||||||||||| | Sbjct 14681 GGGGACATCCGGAGCGGTAGT---TCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGG 14625 Query 19334 CCGTGGGTTCAAGTCCCATCTATCCCGCC 19362 || |||||| |||||| || | ||||| Sbjct 14624 TCGCGGGTTCGAGTCCCGTCCGTTCCGCC 14596 >seq10189 Length=12531 Score = 82.4 bits (90), Expect = 9e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 165787 TAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCACAGGTTCGAGTC 165841 |||||||||||||||||||||| ||||||||||| || |||||||||||||| || Sbjct 55 TAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCACAGGTTCGAATC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621812505163920