Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_031924.1 Length=47564 Score E Sequences producing significant alignments: (Bits) Value seq6497 107 6e-19 >seq6497 Length=13545 Score = 107 bits (118), Expect = 6e-19 Identities = 118/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 32294 CCATCTCGTAGCTTTGCTGATGCTGTTCTGCATAACTGGCTGATTACCGCTGGCAATCCA 32353 ||||| || || ||||||||||| || |||| | ||| | |||||||| || | Sbjct 11821 CCATCACGGAGTTTTGCTGATGCCGTATTGCACACATGGTTAATTACCGCAGGTGAAAGC 11762 Query 32354 GAAAACACAATTGACATCGTGAGGCTGTATGAAATTGCCGACAGTTTGCCAGATGAGCGA 32413 || || | || ||||||| |||| ||| |||| ||| || ||||| ||||||||| Sbjct 11761 GAGAAGAATATCGACATCGACGGGCTATATCGAATTTACGATAGCTTGCCTGATGAGCGA 11702 Query 32414 CTTGGGTATTTCGATTACACGTTTGACGATGAGGATA 32450 || || || ||||||||||| || ||||||||||||| Sbjct 11701 CTAGGTTACTTCGATTACACATTCGACGATGAGGATA 11665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152023302601992