Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq3053 91.5 1e-13 >seq3053 Length=25279 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||||||||| ||||| ||||||| | | || | || || | ||||| || ||||| Sbjct 10154 CTCCTTTTGAATGTTATAATCGGACAATGTACGTCCATCTTCTAATTGCTTTCCAGCAAA 10095 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 || | ||| || ||||||| ||| | || || || ||| ||||| |||| | | Sbjct 10094 AATTAGACGTTGTTGATCTGGAGGAATTCCCTCTTTGTCCTGAATCTTG-GCTTTCACAT 10036 Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | || ||||| | | ||| ||||| | || || ||||| ||||||||||| || | Sbjct 10035 TCTCGATTGTGTCCGAAGGTTCGACCTCTAAGGTGATGGTCTTCCCCGTGAGGGTTTTTA 9976 Query 44325 CGAAGATTTGCATGATGTG 44343 | ||||| ||||| |||| Sbjct 9975 CAAAGATCTGCATTTTGTG 9957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359844888055422