Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq22013 86.0 8e-12 >seq22013 Length=6837 Score = 86.0 bits (94), Expect = 8e-12 Identities = 194/288 (67%), Gaps = 8/288 (3%) Strand=Plus/Minus Query 156164 AAACAATCGTCTGACGTTAGCTTCCGATTCACCCACATATTTGTTTAATAATTCAGGACC 156223 ||| | ||||| | ||| ||||| |||||||| || ||||||| || | | ||||| Sbjct 3418 AAAGAGTCGTCGAATGTTCGCTTCAGATTCACCAACGTATTTGTCCAAAACCTGCGGACC 3359 Query 156224 GTTAACTATTTTGACGGGTCGTGA---TTTAAAAGCTTG-AGCGATACAGCGAGCCATTA 156279 ||| || ||||| ||| || | || || | ||| | |||| || ||||||| Sbjct 3358 GTTGACAATTTT--CGGTTCTCTAGCATTCAACA--TTGTACCGATTTGACGGGCCATTA 3303 Query 156280 ATGTTTTACCGCACCCAGGAGGTCCGTATAACAATACTCCTTTTATATGTTTACAACCTA 156339 | |||||||| ||||| ||||| || || || | || || | || |||||||||| Sbjct 3302 AAGTTTTACCAGTTCCAGGTGGTCCATACAATAAAATACCCTTAACGTGCTTACAACCTA 3243 Query 156340 ATTTTTCAGTTATTTCTACCGGAACTGATCTGGAAGCAAATGCTCTTCGAAAAATGAGAG 156399 | | ||| | ||| |||| | |||||||| |||| |||||| ||| Sbjct 3242 ACTGCTCAACGAGTTCAGGAGGAAACACACGTGAAGCAAAGGCTCGTCGAAATATGGCGT 3183 Query 156400 AAAATTCTTTATCCAATCCCCCCACACCCATTTCCTCAAAATTCCAAT 156447 |||||||| || || || || | ||||||| | |||| ||||| Sbjct 3182 TGAATTCTTTGTCTAAGCCACCAATTCCCATTTTGCCGAAATCCCAAT 3135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666798647298960