Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq3053 154 4e-32 >seq3053 Length=25279 Score = 154 bits (170), Expect = 4e-32 Identities = 164/216 (76%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || || || ||||| ||||| || || || |||||| | ||||| ||| Sbjct 9960 AAAATGC---AGATCTTTGTAAAAACCCTCACGGGGAAGACCATCACCTTAGAGGTCGAA 10016 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || ||||| |||||||| || ||| ||||||||||||||||| ||||| ||||| Sbjct 10017 CCTTCGGACACAATCGAGAATGTGAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCCA 10076 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || || ||||| || || || || ||||| || | ||||||||| | || | ||||| Sbjct 10077 GATCAACAACGTCTAATTTTTGCTGGAAAGCAATTAGAAGATGGACGTACATTGTCCGAT 10136 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130 |||||| | ||||| || |||||| | ||||| ||| Sbjct 10137 TATAACATTCAAAAGGAGTCAACATTACATCTGGTT 10172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203219687216204