Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Themira_20minor_20[genbank_20GCA_5F001014575.1_202015-05-28] 33,166 sequences; 99,885,510 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq31959 87.8 2e-12 >seq31959 Length=2257 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 49614 GACGCCGATGATGCCGCAGCCGAGTCTGCTGCCAGAGTTGCCGGTGATTTTGCTCTGCTC 49673 || |||||| | |||||||||| | | |||| ||||||||| | |||||| |||| Sbjct 508 GATGCCGATCACACCGCAGCCGACGCGGGCCCCAGCATTGCCGGTGGTCTTGCTCAGCTC 567 Query 49674 GTCGTCGCCCAGGCCAAAGTCGTCCTCCATGGCGTGCACCACGATGCTGCGCCCGAGAAT 49733 || | ||||| ||| | |||||| ||||||||| || ||| ||||||||| || Sbjct 568 GTGGCCGCCCTTGCCCAGGTCGTCGGGATCGGCGTGCACGACCATGGTGCGCCCGATGAT 627 Query 49734 GTTGTGCGGGCCGAACAGCGA 49754 | ||| | ||||||||||| Sbjct 628 GCTGTTGGCCCCGAACAGCGA 648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462112340319200