Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2991 102 2e-16 seq3218 100 6e-16 seq1565 100 6e-16 seq7 100 6e-16 seq6004 98.7 2e-15 seq1532 98.7 2e-15 seq5 98.7 2e-15 seq3 98.7 2e-15 >seq2991 Length=42102 Score = 102 bits (112), Expect = 2e-16 Identities = 75/87 (86%), Gaps = 3/87 (3%) Strand=Plus/Minus Query 165698 CTTAAAACGCT---TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTG 165754 ||||| || || |||||| ||||||||||||||||||| | ||||| ||||||| | | Sbjct 730 CTTAATACWCTCAATGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGG 671 Query 165755 GTCGTGGGTTCGAGCCCCACGATGGGC 165781 ||||||||||||||||||||| ||||| Sbjct 670 GTCGTGGGTTCGAGCCCCACGTTGGGC 644 >seq3218 Length=36788 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 36588 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 36529 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 36528 CCCCACGTTGGGC 36516 >seq1565 Length=82145 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||| Sbjct 36046 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGAGTCGTGGGTTCGAG 35987 Query 165769 CCCCACGATGGGC 165781 ||||||||||||| Sbjct 35986 CCCCACGATGGGC 35974 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||||||||||||||||||||||| | ||||| || |||| | ||||||||| ||||| Sbjct 49 TGCCCGTCTAGCTCAGTCGGTAGAGCACGAGACTCTTGATCTCGGGGTCGTGGGCTCGAG 108 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 109 CCCCACGTTGGGC 121 >seq7 Length=109384913 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 6331715 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 6331774 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 6331775 CCCCACGTTGGGC 6331787 >seq6004 Length=7785 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||| || Sbjct 1051 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCRAG 1110 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 1111 CCCCACGTTGGGC 1123 >seq1532 Length=80857 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 49841 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 49900 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 49901 CCCACGTTGGGC 49912 >seq5 Length=36881487 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 25205262 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 25205203 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 25205202 CCCACGTTGGGC 25205191 >seq3 Length=34716904 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 6747375 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 6747434 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 6747435 CCCACGTTGGGC 6747446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057651384279680