Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Timema_20cristinae_20[genbank_20GCA_5F002009905.3_202017-04-13] 12,736 sequences; 1,042,628,579 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq7 113 5e-20 >seq7 Length=109384913 Score = 113 bits (124), Expect = 5e-20 Identities = 136/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 16474 ATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAA 16533 ||| |||||||| || | ||| ||||||||||| || |||||||| |||||||| ||||| Sbjct 105116701 ATATGTATCAATGAGGAGACTATACATTTCTGAATGAATGTTCTCGATGGCTATTTGAAA 105116760 Query 16534 TCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTT 16593 ||||| ||||| | || || | | ||| ||||| |||| |||| | ||||| Sbjct 105116761 ACCATAAAAGCACCTCGCTTCGGTCACTTGCACTTCTTGACTGAATCTTTCCACAAGGTT 105116820 Query 16594 CTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTT 16653 ||||| || || || ||| ||| ||||| || || | | || || ||||||||| | Sbjct 105116821 TTCATTAACAATGCCATCAGATGCRGCAAAGAATGCTAGGACATGTTTGATGAAATATCT 105116880 Query 16654 TTCGTC 16659 || || Sbjct 105116881 CTCATC 105116886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511332982827520